Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pfkb family carbohydrate kinase | NQ492_03945 | Q71TF8 | - | 925972 - 928245 | 85922.0 |
| duf1896 domain-containing protein | NQ492_03950 | Not Available | - | 928235 - 928687 | 17293.2 |
| dna topoisomerase | NQ492_03955 | P96583 | - | 928927 - 931014 | 77424.9 |
| duf3945 domain-containing protein | NQ492_03960 | Not Available | - | 931075 - 932643 | 59665.8 |
| helix-turn-helix domain-containing protein | NQ492_03965 | Not Available | - | 932664 - 933014 | 13894.0 |
| helix-turn-helix domain-containing protein | NQ492_03970 | Not Available | - | 933018 - 933374 | 13345.1 |
| helix-turn-helix domain-containing protein | NQ492_03975 | Not Available | + | 933577 - 933876 | 11551.3 |
| helix-turn-helix domain-containing protein | NQ492_03980 | Not Available | + | 933908 - 934213 | 11780.1 |
| rhum protein | NQ492_03985 | Not Available | - | 934289 - 934651 | 13650.6 |
| site-specific integrase | NQ492_03990 | Q38067 | - | 934664 - 935899 | 47858.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.