Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-beta-hexosaminidase | AL1_25080 | P49008 | - | 2854823 - 2856484 | 63017.6 |
| f5/8 type c domain./domain of unknown function (duf1735). | AL1_25090 | Not Available | - | 2856554 - 2857633 | 39574.6 |
| metal-dependent hydrolase | AL1_25100 | Not Available | - | 2857654 - 2858526 | 32326.0 |
| susd family. | AL1_25110 | T2KN63 | - | 2858546 - 2860312 | 66844.3 |
| fe2+-dicitrate sensor, membrane component | AL1_25130 | Not Available | - | 2863973 - 2864974 | 37746.7 |
| dna polymerase iii, delta subunit | AL1_25170 | P54459 | - | 2866576 - 2867646 | 40014.8 |
| trna(ile)-lysidine synthetase, n-terminal domain/trna(ile)-lysidine synthetase, c-terminal domain | AL1_25180 | A6LBU3 | - | 2867648 - 2868991 | 50998.9 |
| udp-n-acetylenolpyruvoylglucosamine reductase | AL1_25190 | Q7NXN4 | - | 2868988 - 2869995 | 36746.1 |
| hypothetical protein | AL1_25200 | Not Available | + | 2870180 - 2871613 | 52113.0 |
| hypothetical protein | AL1_25210 | Not Available | - | 2871722 - 2871898 | 5975.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.