Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase trme | AL1_24630 | Q5LG80 | - | 2806671 - 2808026 | 48266.6 |
| soluble lytic murein transglycosylase and related regulatory proteins (some contain lysm/invasin domains) | AL1_24640 | P0AEZ8 | - | 2808026 - 2809387 | 51278.7 |
| hypothetical protein | AL1_24650 | Not Available | - | 2809391 - 2810560 | 43906.7 |
| parb-like partition proteins | AL1_24660 | Q9KNG7 | - | 2810568 - 2811437 | 32324.0 |
| chromosome segregation atpase | AL1_24670 | Q9K5N0 | - | 2811450 - 2812220 | 27937.1 |
| parvulin-like peptidyl-prolyl isomerase | AL1_24700 | Q0AC82 | + | 2814523 - 2815914 | 53092.9 |
| arabinose efflux permease | AL1_24720 | P23910 | + | 2818447 - 2819604 | 40841.4 |
| isopentenyldiphosphate isomerase | AL1_24730 | Q8YKE7 | + | 2819591 - 2820091 | 18437.6 |
| small-conductance mechanosensitive channel | AL1_24740 | P0AAT4 | + | 2820173 - 2821642 | 54256.0 |
| predicted permease | AL1_24750 | Q64VB3 | - | 2821611 - 2823272 | 59377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.