Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe2+-dicitrate sensor, membrane component | AL1_23870 | Not Available | - | 2711200 - 2712165 | 36202.7 |
| rna polymerase sigma factor, sigma-70 family/rna polymerase sigma-70 factor, bacteroides expansion family 1 | AL1_23880 | H8EXN1 | - | 2712281 - 2712877 | 23270.2 |
| predicted na+-dependent transporter | AL1_23890 | O34524 | + | 2713028 - 2713906 | 30885.4 |
| outer membrane receptor proteins, mostly fe transport | AL1_23900 | Not Available | + | 2713924 - 2716305 | 87959.4 |
| amino acid transporters | AL1_23910 | P37034 | - | 2716302 - 2717759 | 52519.6 |
| rna polymerase sigma factor, sigma-70 family/rna polymerase sigma-70 factor, bacteroides expansion family 1 | AL1_23920 | Q45585 | + | 2718268 - 2718768 | 19205.2 |
| fe2+-dicitrate sensor, membrane component | AL1_23930 | Not Available | + | 2718893 - 2719891 | 37049.2 |
| hypothetical protein | AL1_23950 | Not Available | + | 2723740 - 2725248 | 56561.8 |
| hypothetical protein | AL1_23960 | Not Available | + | 2725266 - 2727398 | 77748.1 |
| calcineurin-like phosphoesterase. | AL1_23970 | Not Available | + | 2727445 - 2729376 | 71649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.