Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AL1_23660 | Not Available | - | 2684066 - 2684638 | 19804.5 |
| sulfide dehydrogenase (flavoprotein) subunit sudb | AL1_23690 | P25981 | - | 2686247 - 2687131 | 32195.2 |
| Trna-asn | Not Available | Not Available | + | 2688360 - 2688433 | Not Available |
| Trna-val | Not Available | Not Available | + | 2688552 - 2688629 | Not Available |
| site-specific recombinase xerd | AL1_23710 | Q9V1P5 | + | 2688744 - 2689961 | 47205.0 |
| hypothetical protein | AL1_23720 | Not Available | + | 2690162 - 2691088 | 36614.8 |
| hypothetical protein | AL1_23730 | Not Available | + | 2691281 - 2693083 | 68913.9 |
| bacteriophage protein gp37 | AL1_23740 | Not Available | + | 2693314 - 2693952 | 24349.4 |
| hypothetical protein | AL1_23760 | Not Available | + | 2694504 - 2694779 | 10631.8 |
| outer membrane receptor proteins, mostly fe transport | AL1_23770 | T2KPJ3 | + | 2695385 - 2698417 | 111846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.