Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-6-methylguanine dna methyltransferase | AL1_23500 | Q8TI34 | - | 2664451 - 2664924 | 17048.6 |
| hypothetical protein | AL1_23520 | Not Available | - | 2667244 - 2667930 | 26700.6 |
| muramidase (flagellum-specific) | AL1_23530 | Q9X9J3 | - | 2667943 - 2668947 | 38393.3 |
| hypothetical protein | AL1_23540 | Not Available | + | 2669024 - 2669629 | 23600.9 |
| rna polymerase sigma factor, sigma-70 family/rna polymerase sigma-70 factor, bacteroides expansion family 1 | AL1_23580 | O05409 | + | 2672869 - 2673405 | 21068.7 |
| fe2+-dicitrate sensor, membrane component | AL1_23590 | Not Available | + | 2673422 - 2674444 | 39386.7 |
| susd family. | AL1_23610 | T2KPM5 | + | 2677861 - 2679144 | 47578.7 |
| predicted periplasmic protein (duf2233). | AL1_23620 | Not Available | + | 2679197 - 2680120 | 33264.6 |
| hypothetical protein | AL1_23630 | Not Available | + | 2680133 - 2681896 | 60344.7 |
| predicted periplasmic protein (duf2233). | AL1_23650 | Q8BJ48 | - | 2683060 - 2683902 | 30511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.