Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane carboxypeptidase/penicillin-binding protein | AL1_23260 | O87626 | + | 2631724 - 2634126 | 90205.7 |
| hypothetical protein | AL1_23270 | Not Available | - | 2634214 - 2636040 | 67438.6 |
| hypothetical protein | AL1_23280 | Not Available | - | 2636053 - 2636982 | 35146.2 |
| susd family. | AL1_23290 | Not Available | - | 2636998 - 2638647 | 61247.2 |
| tonb-dependent receptor plug domain./tonb dependent receptor. | AL1_23300 | T2KPJ3 | - | 2638675 - 2641944 | 120828.0 |
| arac-type dna-binding domain-containing proteins | AL1_23310 | T2KMF4 | + | 2642631 - 2646737 | 152810.0 |
| aspartate semialdehyde dehydrogenase | AL1_23320 | O67716 | + | 2647039 - 2648031 | 36275.6 |
| site-specific recombinase xerd | AL1_23330 | Q89XW5 | + | 2648296 - 2649516 | 45931.8 |
| domain of unknown function (duf303). | AL1_23340 | Q5RFU0 | - | 2649598 - 2651022 | 51995.4 |
| tyrosine phenol-lyase | AL1_23350 | A2EYC4 | - | 2651025 - 2652407 | 52054.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.