Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AL1_22900 | Not Available | + | 2586676 - 2586834 | 6018.61 |
| site-specific recombinase xerd | AL1_22910 | B7IFN3 | + | 2587288 - 2588412 | 42987.6 |
| beta-galactosidase/beta-glucuronidase | AL1_22920 | Q56307 | - | 2589400 - 2592507 | 116419.0 |
| l-lysine 2,3-aminomutase | AL1_22930 | Q58051 | + | 2592803 - 2594902 | 80364.4 |
| pirin-related protein | AL1_22940 | P46852 | + | 2594962 - 2595675 | 26244.2 |
| bacterial peptide chain release factor 3 (brf-3) | AL1_22950 | Q3A709 | - | 2595746 - 2597329 | 59382.9 |
| l-aspartate oxidase | AL1_22960 | Q9KPA4 | - | 2597502 - 2599061 | 57906.3 |
| s-adenosylmethionine:trna-ribosyltransferase- isomerase (queuine synthetase) | AL1_22970 | A4G1Z2 | + | 2599143 - 2600354 | 45789.7 |
| hypothetical protein | AL1_22980 | Not Available | - | 2600422 - 2601024 | 21460.0 |
| hypothetical protein | AL1_22990 | Not Available | - | 2601160 - 2601810 | 24014.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.