Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family/rna polymerase sigma-70 factor, bacteroides expansion family 1 | AL1_21330 | Q45585 | - | 2420723 - 2421313 | 23041.2 |
| hypothetical protein | AL1_21340 | Not Available | - | 2421413 - 2422507 | 40934.2 |
| metal-dependent hydrolase | AL1_21350 | Q5UQW5 | - | 2422555 - 2423433 | 33212.2 |
| protein of unknown function (duf3127). | AL1_21360 | Not Available | + | 2423783 - 2424145 | 13697.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerases 1 | AL1_21370 | Q9JYI8 | - | 2424426 - 2425538 | 40740.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerases 1 | AL1_21380 | Q8K943 | - | 2425780 - 2426487 | 25715.6 |
| sodium/proton antiporter, nhaa family (tc 2.a.33.1.1) | AL1_21390 | B7J5J3 | - | 2426607 - 2427962 | 49244.6 |
| arginase/agmatinase/formimionoglutamate hydrolase, arginase family | AL1_21400 | Q72JK8 | - | 2428017 - 2429057 | 37428.0 |
| 4-phosphoerythronate dehydrogenase | AL1_21410 | Q5LIR8 | + | 2429150 - 2430145 | 36332.3 |
| competence/damage-inducible protein cina c-terminal domain | AL1_21440 | A6GZI7 | + | 2431672 - 2432913 | 44701.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.