Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrna methylase, putative, group 3 | AL1_19930 | Q06753 | - | 2276736 - 2277476 | 26820.6 |
| atpase components of abc transporters with duplicated atpase domains | AL1_19940 | Q9FIB4 | - | 2277640 - 2279583 | 73924.0 |
| predicted hydrolases of hd superfamily | AL1_19950 | Q7Z4H3 | + | 2279664 - 2280224 | 21114.1 |
| ribulose-5-phosphate 3-epimerase | AL1_19960 | P74061 | - | 2280280 - 2280906 | 21905.6 |
| uncharacterized protein conserved in bacteria | AL1_19970 | Q9JWG3 | + | 2280994 - 2282355 | 50864.3 |
| inactive homolog of metal-dependent proteases, putative molecular chaperone | AL1_20000 | Q87RD1 | - | 2285515 - 2286222 | 25176.0 |
| ssra-binding protein | AL1_20030 | Q5LAY7 | - | 2287470 - 2287931 | 17763.6 |
| dna primase, catalytic core | AL1_20040 | Q9KD44 | - | 2288155 - 2290128 | 74521.1 |
| excinuclease abc subunit b | AL1_20050 | Q5LC24 | + | 2290306 - 2292378 | 78130.0 |
| gtra-like protein. | AL1_20060 | Not Available | - | 2292465 - 2292959 | 18736.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.