Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | AL1_19560 | Q8X574 | + | 2234258 - 2235487 | 47498.0 |
| site-specific recombinase xerd | AL1_19570 | Q8X574 | + | 2235507 - 2236718 | 45972.5 |
| hypothetical protein | AL1_19580 | Not Available | - | 2236783 - 2237076 | 11656.1 |
| hypothetical protein | AL1_19600 | Not Available | - | 2237293 - 2237460 | 6434.92 |
| eco57i restriction endonuclease. | AL1_19610 | Q60301 | + | 2237954 - 2241742 | 146105.0 |
| site-specific recombinases, dna invertase pin homologs | AL1_19630 | P07945 | - | 2243499 - 2244011 | 19680.1 |
| transposase is116/is110/is902 family. | AL1_19640 | P19780 | + | 2244843 - 2245238 | 14091.0 |
| transposase and inactivated derivatives | AL1_19650 | P20665 | + | 2245475 - 2246500 | 38800.2 |
| hypothetical protein | AL1_19660 | Not Available | - | 2247364 - 2247597 | 8926.51 |
| putative amidoligase enzyme. | AL1_19670 | Not Available | - | 2247594 - 2248421 | 31554.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.