Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 2186523 - 2186607 | Not Available |
| uncharacterized fad-dependent dehydrogenases | AL1_19140 | Q05627 | + | 2186704 - 2188257 | 56152.2 |
| glycosyltransferases, probably involved in cell wall biogenesis | AL1_19150 | P71059 | + | 2188261 - 2189154 | 34452.5 |
| protein of unknown function (duf3184). | AL1_19160 | O69851 | + | 2189144 - 2190106 | 37747.1 |
| glycosyltransferases, probably involved in cell wall biogenesis | AL1_19170 | Q8L0V4 | - | 2190133 - 2190900 | 28968.0 |
| protein of unknown function (duf3298). | AL1_19180 | Not Available | - | 2191996 - 2192742 | 27195.7 |
| Trna-glu | Not Available | Not Available | + | 2192883 - 2192957 | Not Available |
| ribosomal subunit interface protein | AL1_19210 | P0AFX2 | - | 2195118 - 2195414 | 11182.4 |
| site-specific recombinase xerd | AL1_19220 | Q93C64 | - | 2195439 - 2196341 | 34593.7 |
| conserved protein/domain typically associated with flavoprotein oxygenases, dim6/ntab family | AL1_19230 | Q9KIT1 | + | 2196486 - 2197070 | 21519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.