Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | AL1_17020 | P56389 | + | 1952234 - 1952689 | 16744.8 |
| ribosomal large subunit pseudouridine synthase d | AL1_17030 | P54604 | + | 1952699 - 1953385 | 25585.6 |
| dna/rna endonuclease g, nuc1 | AL1_17050 | Q9Y2C4 | + | 1953865 - 1955355 | 53897.3 |
| radical sam protein, tigr01212 family | AL1_17060 | P0ADW7 | + | 1955362 - 1956333 | 37035.1 |
| uncharacterized conserved protein | AL1_17070 | O34792 | + | 1956424 - 1957317 | 31576.7 |
| primosomal protein n' | AL1_17080 | P94461 | + | 1957317 - 1959575 | 83605.8 |
| predicted amidophosphoribosyltransferases | AL1_17090 | P46846 | + | 1959559 - 1960281 | 26801.5 |
| primary replicative dna helicase | AL1_17100 | P37469 | + | 1960533 - 1962089 | 57175.4 |
| mg chelatase-related protein | AL1_17110 | P45049 | + | 1962092 - 1963633 | 54229.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | AL1_17120 | A6LEU3 | + | 1963690 - 1964790 | 39544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.