Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase s46. | AL1_16890 | C2M741 | - | 1939205 - 1941190 | 74701.6 |
| maf protein | AL1_16900 | Q8A749 | - | 1941187 - 1941825 | 23974.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | AL1_16910 | P76004 | - | 1941910 - 1942545 | 23949.6 |
| hypothetical protein | AL1_16920 | Not Available | - | 1942555 - 1942869 | 11759.9 |
| trna (guanine37-n(1)-) methyltransferase | AL1_16940 | B2RMA5 | - | 1944159 - 1944836 | 25471.3 |
| zn-dependent hydrolases, including glyoxylases | AL1_16960 | P75849 | - | 1945783 - 1946451 | 24476.9 |
| esterase/lipase | AL1_16970 | A0A0G3FWY4 | + | 1946543 - 1947367 | 30182.4 |
| 23s rrna m(5)u-1939 methyltransferase | AL1_16990 | Q8AA22 | + | 1948652 - 1950061 | 52846.5 |
| peptidase family m23. | AL1_17000 | Not Available | + | 1950150 - 1951028 | 33433.8 |
| uncharacterized conserved protein | AL1_17010 | Not Available | + | 1951190 - 1951879 | 25345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.