Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i site-specific deoxyribonuclease, hsdr family | AL1_16400 | Q60295 | - | 1872475 - 1875687 | 123686.0 |
| hypothetical protein | AL1_16410 | Not Available | - | 1875696 - 1876406 | 27624.0 |
| restriction endonuclease s subunits | AL1_16420 | Q58926 | - | 1876599 - 1877813 | 45680.8 |
| hypothetical protein | AL1_16430 | Not Available | - | 1877807 - 1878535 | 27885.0 |
| type i restriction system adenine methylase (hsdm) | AL1_16440 | P10484 | - | 1878627 - 1880153 | 57647.0 |
| restriction endonuclease s subunits | AL1_16450 | Not Available | - | 1880143 - 1880709 | 21000.5 |
| plasmid recombination enzyme. | AL1_16460 | P15255 | - | 1880887 - 1882311 | 54090.4 |
| dna primase (bacterial type) | AL1_16470 | P52308 | - | 1882556 - 1883440 | 33113.6 |
| dna binding domain, excisionase family | AL1_16480 | Not Available | - | 1883443 - 1883733 | 11139.5 |
| competence protein coia-like family. | AL1_16490 | Not Available | - | 1883938 - 1884921 | 38702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.