Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative phosphatase. | AL1_16200 | O51040 | - | 1852481 - 1853320 | 31738.9 |
| nitroreductase | AL1_16210 | O26223 | + | 1853576 - 1854106 | 19281.1 |
| signal transduction histidine kinase | AL1_16220 | Q8D5Z6 | - | 1854143 - 1857292 | 119755.0 |
| exonuclease recj | AL1_16230 | O32044 | - | 1857408 - 1859117 | 63461.8 |
| lipoate-protein ligase b | AL1_16240 | Q5LDM3 | - | 1859351 - 1860058 | 25464.5 |
| lipoate synthase | AL1_16250 | Q64XQ0 | - | 1860061 - 1860942 | 32985.9 |
| hypothetical protein | AL1_16260 | Not Available | + | 1861024 - 1861149 | 4453.69 |
| hypothetical protein | AL1_16270 | Not Available | + | 1861300 - 1861737 | 16382.8 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | AL1_16280 | A4WG91 | - | 1862055 - 1862939 | 34517.1 |
| hypothetical protein | AL1_16290 | Not Available | - | 1863133 - 1864164 | 35542.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.