Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(2)a-2503 methyltransferase | AL1_15010 | Q5LGK5 | + | 1711656 - 1712684 | 38528.4 |
| thiol:disulfide interchange protein | AL1_15020 | A7MMC7 | + | 1712795 - 1713223 | 16319.0 |
| rna polymerase sigma factor, sigma-70 family | AL1_15040 | Q45585 | - | 1713986 - 1714549 | 22196.3 |
| glycosyltransferases, probably involved in cell wall biogenesis | AL1_15050 | Not Available | - | 1714540 - 1715694 | 44323.3 |
| pp_01179 | AL1_15060 | Not Available | + | 1715754 - 1716884 | Not Available |
| hypothetical protein | AL1_15070 | Not Available | + | 1716921 - 1717793 | 32584.5 |
| predicted permeases | AL1_15080 | Not Available | + | 1717805 - 1718908 | 42331.6 |
| uncharacterized protein conserved in bacteria | AL1_15090 | Q8R9T6 | + | 1718919 - 1719875 | 35256.4 |
| ribosomal large subunit pseudouridine synthase d | AL1_15100 | O50310 | + | 1719875 - 1720960 | 40981.8 |
| predicted membrane protein | AL1_15120 | Q7ULI3 | - | 1723004 - 1724281 | 45988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.