Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | AL1_13860 | T2KPJ3 | + | 1582444 - 1585512 | 113246.0 |
| susd family. | AL1_13870 | T2KN63 | + | 1585535 - 1587385 | 70750.6 |
| f5/8 type c domain. | AL1_13880 | Not Available | + | 1587415 - 1588287 | 32843.5 |
| endoglucanase | AL1_13890 | A3DJ77 | + | 1588284 - 1590050 | 66372.0 |
| endopolygalacturonase | AL1_13900 | A2RAY7 | + | 1590104 - 1591543 | 53079.4 |
| hypothetical protein | AL1_13910 | Not Available | + | 1591609 - 1593045 | 49925.6 |
| hypothetical protein | AL1_13920 | Not Available | + | 1593181 - 1594701 | 55773.0 |
| n-acetyl-beta-hexosaminidase | AL1_13930 | P49008 | + | 1594894 - 1596630 | 66335.6 |
| hypothetical protein | AL1_13950 | Not Available | - | 1597611 - 1598162 | 20225.0 |
| hypothetical protein | AL1_13960 | Not Available | - | 1598169 - 1599482 | 50408.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.