Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| catalase | AL1_12360 | P45737 | + | 1415658 - 1417151 | 56998.8 |
| uncharacterized conserved protein | AL1_12390 | O34792 | - | 1420251 - 1421240 | 36077.5 |
| conserved hypothetical integral membrane protein tigr00023 | AL1_12400 | A1BJJ2 | + | 1421375 - 1422076 | 25704.2 |
| long-chain acyl-coa synthetases (amp-forming) | AL1_12410 | Q8LKS5 | + | 1422196 - 1423896 | 63694.5 |
| putative regulator of cell autolysis | AL1_12420 | Q4A009 | + | 1424127 - 1425197 | 41269.4 |
| response regulator of the lytr/algr family | AL1_12430 | Q9KL96 | + | 1425190 - 1425930 | 28231.0 |
| hypothetical protein | AL1_12440 | Not Available | - | 1426006 - 1426458 | 16744.3 |
| beta-galactosidase/beta-glucuronidase | AL1_12450 | P06864 | + | 1426510 - 1427808 | 48095.0 |
| Trna-lys | Not Available | Not Available | + | 1427915 - 1427987 | Not Available |
| site-specific recombinase xerd | AL1_12460 | A8F7B4 | + | 1428275 - 1429489 | 46462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.