Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory pathway, vird4 components | AL1_12060 | Not Available | - | 1388678 - 1390456 | 66832.5 |
| hypothetical protein | AL1_12070 | Not Available | - | 1390568 - 1390693 | 4933.93 |
| relaxase/mobilisation nuclease domain. | AL1_12080 | Not Available | - | 1390715 - 1392007 | 50054.2 |
| hypothetical protein | AL1_12100 | Not Available | - | 1392241 - 1392417 | 6816.12 |
| atpases involved in chromosome partitioning | AL1_12110 | Q72H90 | + | 1392999 - 1393772 | 29111.4 |
| protein of unknown function (duf3408). | AL1_12120 | Not Available | + | 1393765 - 1394148 | 14435.9 |
| hypothetical protein | AL1_12130 | Not Available | + | 1394163 - 1394888 | 26963.2 |
| hypothetical protein | AL1_12140 | Not Available | + | 1395122 - 1395346 | 7898.66 |
| hypothetical protein | AL1_12150 | Not Available | + | 1395350 - 1395664 | 11388.5 |
| rna-directed dna polymerase | AL1_12190 | P19593 | - | 1396576 - 1398258 | 64662.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.