Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | AL1_11900 | P02930 | + | 1367834 - 1369072 | 45419.7 |
| predicted redox protein, regulator of disulfide bond formation | AL1_11910 | P0ADX3 | - | 1369121 - 1369504 | 14103.9 |
| hypothetical protein | AL1_11930 | Not Available | + | 1372621 - 1374360 | 64557.9 |
| superoxide dismutase | AL1_11940 | P31108 | + | 1374544 - 1375269 | 27284.4 |
| hypothetical protein | AL1_11950 | Not Available | + | 1375912 - 1376259 | 13728.9 |
| helicase conserved c-terminal domain. | AL1_11960 | Q71TF8 | - | 1376311 - 1379448 | 119286.0 |
| hypothetical protein | AL1_11990 | Not Available | - | 1381804 - 1381980 | 6173.39 |
| hypothetical protein | AL1_12010 | Not Available | - | 1382413 - 1383210 | 29831.9 |
| domain of unknown function (duf1837). | AL1_12040 | Not Available | - | 1386441 - 1387340 | 34699.6 |
| predicted atpase (aaa+ superfamily) | AL1_12050 | P9WLM8 | - | 1387359 - 1388348 | 37477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.