Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding protein family | AL1_11680 | P0A974 | + | 1332880 - 1333326 | 16772.8 |
| rna-binding proteins (rrm domain) | AL1_11690 | Q44554 | + | 1333354 - 1333704 | 12282.0 |
| predicted dna-binding protein with the helix-hairpin-helix motif | AL1_11700 | Not Available | + | 1333894 - 1335153 | 47608.4 |
| hypothetical protein | AL1_11710 | Not Available | + | 1335158 - 1335919 | 29880.6 |
| multiple antibiotic transporter | AL1_11720 | Q9UZ49 | - | 1335949 - 1336620 | 23993.2 |
| Trna-ser | Not Available | Not Available | + | 1336851 - 1336942 | Not Available |
| hypothetical protein | AL1_11730 | Not Available | + | 1337269 - 1338450 | 44923.9 |
| endopolygalacturonase | AL1_11740 | A7PZL3 | + | 1338564 - 1340231 | 59735.9 |
| pectate lyase | AL1_11750 | B8NQQ7 | + | 1340275 - 1342095 | 64512.5 |
| predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins | AL1_11780 | O34559 | + | 1347371 - 1348573 | 44570.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.