Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AL1_11310 | Not Available | - | 1281357 - 1281980 | 23343.8 |
| uncharacterized protein conserved in bacteria | AL1_11320 | P0AAT3 | + | 1282066 - 1282449 | 14721.5 |
| domain of unknown function (duf1080). | AL1_11330 | Not Available | + | 1282487 - 1283119 | 22855.0 |
| nicotinamide mononucleotide transporter pnuc | AL1_11340 | P24520 | - | 1284501 - 1285115 | 22888.4 |
| outer membrane receptor proteins, mostly fe transport | AL1_11350 | A5F661 | - | 1285305 - 1287593 | 85348.3 |
| galactose mutarotase and related enzymes | AL1_11360 | P05149 | - | 1287921 - 1288976 | 39057.9 |
| rna polymerase sigma factor, sigma-70 family | AL1_11400 | O07582 | + | 1293269 - 1293844 | 22356.2 |
| fe2+-dicitrate sensor, membrane component | AL1_11410 | Not Available | + | 1293960 - 1295183 | 45349.5 |
| outer membrane cobalamin receptor protein | AL1_11420 | T2KM18 | + | 1295269 - 1298688 | 127017.0 |
| susd family. | AL1_11430 | T2KNB8 | + | 1298701 - 1300587 | 71835.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.