Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase/beta-glucuronidase | AL1_10960 | T2KPJ7 | + | 1234926 - 1236959 | 76170.0 |
| hypothetical protein | AL1_10970 | Not Available | + | 1237243 - 1237491 | 9081.05 |
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | AL1_10980 | Q7MVT7 | - | 1237734 - 1239218 | 54383.4 |
| hypothetical protein | AL1_10990 | Not Available | + | 1239536 - 1239970 | 15212.7 |
| protein of unknown function (duf3108). | AL1_11010 | Not Available | + | 1242295 - 1243092 | 30921.9 |
| hypothetical protein | AL1_11020 | Not Available | + | 1243208 - 1244143 | 35208.1 |
| hypothetical protein | AL1_11030 | Not Available | - | 1244469 - 1245542 | 40435.5 |
| glucokinase | AL1_11040 | P0A4E1 | - | 1245623 - 1246627 | 36025.2 |
| geranylgeranyl pyrophosphate synthase | AL1_11050 | Q8PW34 | + | 1246746 - 1247717 | 35968.6 |
| collagenase. unknown type peptidase. merops family u32 | AL1_11060 | P59916 | + | 1247721 - 1248971 | 45469.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.