Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s15p | AL1_10820 | A6KYS7 | + | 1216716 - 1216988 | 10484.7 |
| polyribonucleotide nucleotidyltransferase | AL1_10830 | Q5L7Z7 | + | 1217082 - 1219325 | 82836.8 |
| tetratricopeptide repeat. | AL1_10840 | Not Available | + | 1219586 - 1221307 | 61588.3 |
| deoxyribose-phosphate aldolase | AL1_10850 | Q91YP3 | + | 1221545 - 1222426 | 31857.9 |
| hypothetical protein | AL1_10860 | Not Available | - | 1222860 - 1223126 | 9264.46 |
| c-terminal peptidase (prc) | AL1_10870 | Q44879 | - | 1223113 - 1224750 | 60236.9 |
| apurinic endonuclease (apn1) | AL1_10890 | A8AE66 | + | 1226132 - 1226980 | 31318.2 |
| ornithine/acetylornithine aminotransferase | AL1_10900 | Q8TUZ5 | - | 1227013 - 1228206 | 43799.2 |
| rrna methylases | AL1_10910 | O51081 | - | 1228255 - 1228986 | 26891.1 |
| hypothetical protein | AL1_10950 | Not Available | + | 1230867 - 1234187 | 120227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.