Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AL1_08850 | Not Available | - | 1008579 - 1008980 | 14951.0 |
| hypothetical protein | AL1_08880 | Not Available | - | 1012515 - 1012685 | 6295.58 |
| hypothetical protein | AL1_08890 | Not Available | - | 1012678 - 1012998 | 11750.0 |
| hypothetical protein | AL1_08910 | Not Available | - | 1013373 - 1013474 | 3735.33 |
| protein of unknown function (duf3408). | AL1_08930 | Not Available | - | 1014264 - 1014626 | 14179.3 |
| protein of unknown function (duf3408). | AL1_08940 | Not Available | - | 1014623 - 1015066 | 16887.3 |
| cobq/cobb/mind/para nucleotide binding domain. | AL1_08950 | Not Available | - | 1015070 - 1015831 | 29127.3 |
| hypothetical protein | AL1_08960 | Not Available | + | 1016979 - 1017137 | 6043.52 |
| relaxase/mobilisation nuclease domain. | AL1_08970 | Not Available | + | 1017374 - 1018828 | 54728.1 |
| hypothetical protein | AL1_08980 | Not Available | - | 1018895 - 1019356 | 17833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.