Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family/rna polymerase sigma-70 factor, bacteroides expansion family 1 | AL1_08630 | O05404 | + | 987908 - 988492 | 22711.6 |
| fe2+-dicitrate sensor, membrane component | AL1_08640 | Not Available | + | 988688 - 989638 | 35837.1 |
| outer membrane receptor proteins, mostly fe transport | AL1_08650 | T2KPJ3 | + | 989917 - 993141 | 119359.0 |
| hypothetical protein | AL1_08660 | Not Available | + | 993147 - 994727 | 59061.4 |
| hypothetical protein | AL1_08670 | Not Available | + | 994737 - 995654 | 32826.1 |
| domain of unknown function (duf1735). | AL1_08680 | Not Available | + | 995654 - 996274 | 23730.1 |
| pentaxin family. | AL1_08690 | Not Available | + | 996351 - 996929 | 21912.7 |
| glycosyl hydrolases family 18. | AL1_08700 | P36911 | + | 997013 - 998476 | 53591.3 |
| hypothetical protein | AL1_08710 | P04067 | + | 998596 - 999474 | 31325.1 |
| glycosyl hydrolases family 18. | AL1_08720 | P80036 | + | 999742 - 1000506 | 27845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.