Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4981 domain-containing protein | NQ492_10345 | Q56307 | - | 2438726 - 2441833 | 116535.0 |
| helix-turn-helix domain-containing protein | NQ492_10350 | Not Available | + | 2442552 - 2442860 | 11745.3 |
| type ii toxin-antitoxin system hipa family toxin | NQ492_10355 | Q8EIX3 | + | 2442872 - 2444362 | 56781.9 |
| metallophosphoesterase | NQ492_10360 | Q5UQ73 | - | 2444600 - 2445367 | 29629.3 |
| metallophosphoesterase | NQ492_10365 | Q58840 | - | 2445369 - 2445947 | 22518.9 |
| n-6 dna methylase | NQ492_10370 | Q89Z59 | + | 2446607 - 2449120 | 95265.2 |
| aaa family atpase | NQ492_10375 | Not Available | + | 2449122 - 2450843 | 65463.2 |
| helix-turn-helix transcriptional regulator | NQ492_10380 | Not Available | + | 2451043 - 2451327 | 10676.2 |
| type i restriction endonuclease subunit r | NQ492_10385 | Q5HK76 | + | 2451350 - 2454178 | 109202.0 |
| duf5655 domain-containing protein | NQ492_10390 | P44169 | + | 2454181 - 2455104 | 35801.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.