Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | NQ492_10095 | H8EXN1 | - | 2380851 - 2381447 | 23270.2 |
| bile acid:sodium symporter family protein | NQ492_10100 | O34524 | + | 2381598 - 2382476 | 30885.4 |
| tonb-dependent receptor | NQ492_10105 | Not Available | + | 2382494 - 2384875 | 87959.4 |
| apc family permease | NQ492_10110 | P37034 | - | 2384872 - 2386329 | 52519.6 |
| rna polymerase sigma-70 factor | NQ492_10115 | Q45585 | + | 2386808 - 2387338 | 20491.7 |
| fecr family protein | NQ492_10120 | Not Available | + | 2387463 - 2388461 | 37049.2 |
| susc/raga family tonb-linked outer membrane protein | NQ492_10125 | T2KM18 | + | 2388691 - 2392296 | 131721.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | NQ492_10130 | Not Available | + | 2392310 - 2393818 | 56561.8 |
| duf5689 domain-containing protein | NQ492_10135 | Not Available | + | 2393836 - 2395968 | 77748.1 |
| calcineurin-like phosphoesterase family protein | NQ492_10140 | Not Available | + | 2395988 - 2397946 | 72723.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.