Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | + | 2356930 - 2357003 | Not Available |
| Trna-val | Not Available | Not Available | + | 2357122 - 2357196 | Not Available |
| site-specific integrase | NQ492_10005 | Q9V1P5 | + | 2357314 - 2358531 | 47205.0 |
| hypothetical protein | NQ492_10010 | Not Available | + | 2358732 - 2359658 | 36614.8 |
| hypothetical protein | NQ492_10015 | Not Available | + | 2360082 - 2361653 | 60274.2 |
| phage gp37/gp68 family protein | NQ492_10020 | Not Available | + | 2361776 - 2362522 | 28180.0 |
| hypothetical protein | NQ492_10025 | Not Available | + | 2362691 - 2363077 | 15097.0 |
| hypothetical protein | NQ492_10030 | Not Available | + | 2363074 - 2363349 | 10631.8 |
| susc/raga family tonb-linked outer membrane protein | NQ492_10035 | T2KPJ3 | + | 2363955 - 2366987 | 111846.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | NQ492_10040 | Not Available | + | 2367007 - 2368755 | 65883.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.