Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | NQ492_09945 | T2KM18 | + | 2343118 - 2346450 | 122228.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ492_09950 | T2KPM5 | + | 2346462 - 2347745 | 47578.7 |
| phosphodiester glycosidase family protein | NQ492_09955 | Not Available | + | 2347780 - 2348721 | 34107.7 |
| hypothetical protein | NQ492_09960 | Not Available | + | 2348734 - 2350497 | 60344.7 |
| sugar phosphate isomerase/epimerase | NQ492_09965 | B1L9C6 | + | 2350654 - 2351583 | 35230.5 |
| phosphodiester glycosidase family protein | NQ492_09970 | Q8BJ48 | - | 2351662 - 2352504 | 30511.2 |
| lipocalin family protein | NQ492_09975 | Not Available | - | 2352668 - 2353240 | 19804.5 |
| nadph-dependent glutamate synthase | NQ492_09980 | Q8U195 | - | 2353293 - 2354693 | 49798.8 |
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | NQ492_09985 | P25981 | - | 2354817 - 2355701 | 32195.2 |
| duf1573 domain-containing protein | NQ492_09990 | Not Available | - | 2355725 - 2356804 | 39149.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.