Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit n | NQ492_09895 | Q64Y15 | + | 2331742 - 2333169 | 51761.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | NQ492_09900 | Q8TI34 | - | 2333266 - 2333739 | 17048.6 |
| s9 family peptidase | NQ492_09905 | B8N970 | - | 2333736 - 2335871 | 81088.5 |
| hypothetical protein | NQ492_09910 | Not Available | - | 2336059 - 2336745 | 26700.6 |
| glucosaminidase domain-containing protein | NQ492_09915 | Q9X9J3 | - | 2336758 - 2337762 | 38393.3 |
| duf4254 domain-containing protein | NQ492_09920 | Not Available | + | 2337839 - 2338444 | 23600.9 |
| glycosyltransferase family 9 protein | NQ492_09925 | P24173 | + | 2338428 - 2339543 | 39885.4 |
| duf4886 domain-containing protein | NQ492_09930 | A7LXT7 | + | 2339761 - 2341428 | 59293.7 |
| rna polymerase sigma-70 factor | NQ492_09935 | O05409 | + | 2341434 - 2342006 | 22510.4 |
| fecr family protein | NQ492_09940 | Not Available | + | 2342023 - 2343045 | 39386.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.