Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | NQ492_09595 | Not Available | + | 2254815 - 2255966 | 43921.8 |
| zeta toxin family protein | NQ492_09600 | P44173 | + | 2256124 - 2256705 | 21680.8 |
| hypothetical protein | NQ492_09605 | Not Available | + | 2256716 - 2256850 | 5059.42 |
| site-specific integrase | NQ492_09610 | B7IFN3 | + | 2257238 - 2258428 | 45414.6 |
| duf4981 domain-containing protein | NQ492_09615 | Q56307 | - | 2259051 - 2262158 | 116419.0 |
| kama family protein | NQ492_09620 | Q58051 | + | 2262454 - 2264553 | 80364.4 |
| pirin family protein | NQ492_09625 | P46852 | + | 2264613 - 2265326 | 26244.2 |
| peptide chain release factor 3 | NQ492_09630 | Q3A709 | - | 2265397 - 2266980 | 59382.9 |
| l-aspartate oxidase | NQ492_09635 | Q9KPA4 | - | 2267153 - 2268712 | 57906.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | NQ492_09640 | A4G1Z2 | + | 2268794 - 2270005 | 45789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.