Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | NQ492_09145 | Not Available | + | 2157128 - 2160469 | 117020.0 |
| hypothetical protein | NQ492_09150 | Not Available | + | 2160612 - 2161025 | 15663.7 |
| is3 family transposase | NQ492_09155 | P16940 | + | 2161022 - 2161912 | 34853.1 |
| gfo/idh/moca family oxidoreductase | NQ492_09160 | Q6M0B9 | + | 2162044 - 2163297 | 48051.3 |
| Trna-thr | Not Available | Not Available | + | 2163537 - 2163608 | Not Available |
| nad-dependent epimerase/dehydratase family protein | NQ492_09170 | Q4L3L8 | + | 2163723 - 2164673 | 35015.0 |
| alpha/beta hydrolase | NQ492_09175 | P54567 | + | 2164849 - 2165808 | 35730.1 |
| class ii fructose-1,6-bisphosphate aldolase | NQ492_09180 | O83668 | - | 2166050 - 2167051 | 36167.3 |
| fumarate hydratase | NQ492_09185 | P14407 | + | 2167370 - 2168983 | 59224.0 |
| batd family protein | NQ492_09190 | Not Available | + | 2169455 - 2171311 | 68202.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.