Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | NQ492_08995 | Q8TZV9 | + | 2112572 - 2113777 | 46024.8 |
| duf3575 domain-containing protein | NQ492_09000 | Not Available | + | 2114958 - 2116142 | 45327.3 |
| duf5119 domain-containing protein | NQ492_09005 | Not Available | + | 2116139 - 2117128 | 36343.1 |
| fimbrillin family protein | NQ492_09010 | A6L3B5 | + | 2117173 - 2118255 | 38852.6 |
| fimbrillin family protein | NQ492_09015 | Not Available | + | 2118371 - 2119396 | 37300.5 |
| duf4906 domain-containing protein | NQ492_09020 | Not Available | + | 2119402 - 2122176 | 103323.0 |
| abc transporter atp-binding protein | NQ492_09025 | Q9WXX8 | - | 2122240 - 2123019 | 28780.6 |
| zinc abc transporter substrate-binding protein | NQ492_09030 | O05703 | - | 2123016 - 2123867 | 31721.7 |
| pfkb family carbohydrate kinase | NQ492_09035 | Not Available | - | 2124183 - 2124482 | 11809.3 |
| pfkb family carbohydrate kinase | NQ492_09040 | Not Available | - | 2124602 - 2125130 | 20088.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.