Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | NQ492_08945 | Not Available | - | 2097991 - 2099775 | 64807.3 |
| ragb/susd family nutrient uptake outer membrane protein | NQ492_08950 | T2KNB8 | - | 2099810 - 2101612 | 68858.1 |
| tonb-dependent receptor | NQ492_08955 | T2KPJ3 | - | 2101624 - 2104902 | 122531.0 |
| nucleoside hydrolase | NQ492_08960 | Not Available | - | 2104929 - 2105957 | 37639.7 |
| grp family sugar transporter | NQ492_08965 | Q9ZPR7 | - | 2105973 - 2106983 | 35536.0 |
| ribokinase | NQ492_08970 | P0A9J7 | - | 2107014 - 2107922 | 30999.2 |
| laci family transcriptional regulator | NQ492_08975 | P0ACQ2 | + | 2108276 - 2109295 | 37101.8 |
| site-specific integrase | NQ492_08980 | Q980D9 | + | 2109582 - 2110811 | 47113.9 |
| duf3408 domain-containing protein | NQ492_08985 | Not Available | - | 2111108 - 2111605 | 18941.6 |
| mobilization protein | NQ492_08990 | Not Available | + | 2112061 - 2112471 | 16321.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.