Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | NQ492_08795 | Q58708 | - | 2058758 - 2059531 | 28472.3 |
| dicarboxylate/amino acid:cation symporter | NQ492_08800 | Q9KNC9 | + | 2059600 - 2060754 | 40157.1 |
| helix-turn-helix domain-containing protein | NQ492_08805 | Not Available | + | 2061082 - 2061375 | 11481.8 |
| hypothetical protein | NQ492_08810 | Not Available | + | 2061527 - 2062465 | 36745.9 |
| pl29 family lyase n-terminal domain-containing protein | NQ492_08815 | Not Available | - | 2062694 - 2064676 | 72597.2 |
| site-specific integrase | NQ492_08820 | A8F7B4 | - | 2065667 - 2066773 | 42531.8 |
| pyridoxal phosphate-dependent aminotransferase family protein | NQ492_08825 | A7BFV6 | + | 2067194 - 2068465 | 46744.1 |
| Trna-gly | Not Available | Not Available | + | 2068625 - 2068697 | Not Available |
| pfkb family carbohydrate kinase | NQ492_08835 | Not Available | + | 2068958 - 2069170 | 8483.25 |
| crispr-associated endonuclease cas2 | NQ492_08840 | A6GZS1 | - | 2070160 - 2070498 | 13340.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.