Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | NQ492_08645 | Q5LHL3 | + | 2021624 - 2022544 | 33983.5 |
| rna methyltransferase | NQ492_08650 | O51081 | + | 2022624 - 2023250 | 23227.9 |
| aspartate aminotransferase family protein | NQ492_08655 | Q8TUZ5 | + | 2023299 - 2024492 | 43799.2 |
| deoxyribonuclease iv | NQ492_08660 | A8AE66 | - | 2024525 - 2025373 | 31318.2 |
| duf3078 domain-containing protein | NQ492_08665 | Not Available | + | 2025470 - 2026711 | 47322.3 |
| s41 family peptidase | NQ492_08670 | Q44879 | + | 2026755 - 2028392 | 60236.9 |
| hypothetical protein | NQ492_08675 | Not Available | + | 2028379 - 2028645 | 9264.46 |
| deoxyribose-phosphate aldolase | NQ492_08680 | Q91YP3 | - | 2028765 - 2029646 | 31857.9 |
| hypothetical protein | NQ492_08685 | Not Available | - | 2029884 - 2031605 | 61588.3 |
| polyribonucleotide nucleotidyltransferase | NQ492_08690 | Q5L7Z7 | - | 2031866 - 2034109 | 82836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.