Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ492_08595 | Not Available | - | 2007678 - 2008613 | 35208.1 |
| duf3108 domain-containing protein | NQ492_08600 | Not Available | - | 2008729 - 2009526 | 30921.9 |
| atp-dependent dna helicase recg | NQ492_08605 | Q55681 | - | 2009570 - 2011681 | 78879.5 |
| radical sam-associated putative lipoprotein | NQ492_08610 | Not Available | - | 2011851 - 2012285 | 15212.7 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | NQ492_08615 | Q7MVT7 | + | 2012603 - 2014087 | 54383.4 |
| wbqc family protein | NQ492_08620 | P9WLW4 | + | 2014336 - 2014941 | 23058.7 |
| beta-galactosidase | NQ492_08625 | T2KPJ7 | - | 2014862 - 2016895 | 76170.0 |
| hypothetical protein | NQ492_08630 | Not Available | - | 2017318 - 2020638 | 120227.0 |
| helix-turn-helix transcriptional regulator | NQ492_08635 | P06153 | + | 2020796 - 2021008 | 8268.13 |
| cvpa family protein | NQ492_08640 | Not Available | + | 2021116 - 2021631 | 18607.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.