Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ492_08345 | Not Available | - | 1936502 - 1937998 | 54994.8 |
| duf4843 domain-containing protein | NQ492_08350 | Not Available | - | 1938010 - 1938918 | 34925.1 |
| ragb/susd family nutrient uptake outer membrane protein | NQ492_08355 | T2KPM5 | - | 1938929 - 1940368 | 54263.1 |
| susc/raga family tonb-linked outer membrane protein | NQ492_08360 | T2KMI3 | - | 1940382 - 1943705 | 124027.0 |
| zinc-dependent metalloprotease | NQ492_08365 | Not Available | - | 1943755 - 1946421 | 99769.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | NQ492_08370 | Q5L9P3 | - | 1946737 - 1948053 | 48543.5 |
| 50s ribosomal protein l34 | NQ492_08375 | B2RIL8 | + | 1948368 - 1948529 | 6195.64 |
| gnat family n-acetyltransferase | NQ492_08380 | P21340 | + | 1948599 - 1949096 | 19243.3 |
| metallophosphoesterase | NQ492_08385 | O74480 | - | 1949117 - 1950256 | 42520.0 |
| duf4924 family protein | NQ492_08390 | Not Available | - | 1950279 - 1950842 | 21656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.