Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porv/porq family protein | NQ492_08245 | Not Available | - | 1902303 - 1903283 | 34377.8 |
| s8 family serine peptidase | NQ492_08250 | Q45670 | - | 1903295 - 1905679 | 84414.2 |
| duf4302 domain-containing protein | NQ492_08255 | Not Available | - | 1905747 - 1906712 | 36798.2 |
| putative zinc-binding metallopeptidase | NQ492_08260 | Not Available | - | 1906722 - 1907606 | 33527.4 |
| ragb/susd family nutrient uptake outer membrane protein | NQ492_08265 | Not Available | - | 1907635 - 1909314 | 63560.9 |
| susc/raga family tonb-linked outer membrane protein | NQ492_08270 | Q8A1G1 | - | 1909327 - 1912647 | 123397.0 |
| hypothetical protein | NQ492_08275 | Not Available | - | 1912736 - 1913812 | 39068.6 |
| response regulator | NQ492_08280 | T2KMF4 | - | 1913994 - 1918067 | 154351.0 |
| duf1080 domain-containing protein | NQ492_08285 | Not Available | + | 1918317 - 1919621 | 49288.9 |
| gfo/idh/moca family oxidoreductase | NQ492_08290 | B5F3F4 | + | 1919710 - 1920990 | 47934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.