Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | NQ492_07995 | O50310 | - | 1842100 - 1843185 | 40981.8 |
| pasta domain-containing protein | NQ492_08000 | Q8R9T6 | - | 1843185 - 1844141 | 35256.4 |
| lptf/lptg family permease | NQ492_08005 | Not Available | - | 1844152 - 1845255 | 42331.6 |
| hypothetical protein | NQ492_08010 | Not Available | - | 1845267 - 1846139 | 32584.5 |
| trna guanosine(34) transglycosylase tgt | NQ492_08015 | Q67Q92 | - | 1846176 - 1847306 | 42205.6 |
| glycosyltransferase | NQ492_08020 | Not Available | + | 1847366 - 1848520 | 44323.3 |
| rna polymerase sigma factor | NQ492_08025 | Q45585 | + | 1848511 - 1849074 | 22196.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | NQ492_08030 | Q11VU7 | + | 1849107 - 1849727 | 23171.1 |
| thioredoxin family protein | NQ492_08035 | A7MMC7 | - | 1849837 - 1850265 | 16319.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | NQ492_08040 | Q5LGK5 | - | 1850376 - 1851404 | 38528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.