Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| clp protease clpp | NQ492_07845 | Q5NNY8 | + | 1813144 - 1814016 | 31288.6 |
| hypothetical protein | NQ492_07850 | Not Available | + | 1814201 - 1815178 | 36418.0 |
| phage portal protein | NQ492_07855 | P51717 | + | 1815248 - 1816474 | 45998.1 |
| hypothetical protein | NQ492_07860 | Not Available | + | 1817034 - 1817507 | 17451.8 |
| phage holin family protein | NQ492_07865 | Not Available | + | 1817482 - 1817907 | 15614.2 |
| structural protein p5 | NQ492_07870 | Q9XJR2 | + | 1817900 - 1818301 | 14824.6 |
| comec family competence protein | NQ492_07875 | P39695 | + | 1818336 - 1819814 | 52158.1 |
| class i sam-dependent methyltransferase | NQ492_07880 | B0TX95 | + | 1819811 - 1820956 | 42100.7 |
| yihy/virulence factor brkb family protein | NQ492_07885 | Q13WE0 | + | 1820988 - 1822292 | 49438.2 |
| f420-dependent nadp oxidoreductase | NQ492_07890 | Not Available | + | 1822307 - 1823086 | 28238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.