Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid recombination protein | NQ492_07345 | P15255 | + | 1684447 - 1685871 | 54090.4 |
| restriction endonuclease subunit s | NQ492_07350 | Not Available | + | 1686049 - 1686615 | 21000.5 |
| type i restriction-modification system subunit m | NQ492_07355 | P10484 | + | 1686605 - 1688131 | 57647.0 |
| hypothetical protein | NQ492_07360 | Not Available | + | 1688223 - 1688951 | 27885.0 |
| restriction endonuclease subunit s | NQ492_07365 | Q58926 | + | 1688945 - 1690159 | 45680.8 |
| duf2188 domain-containing protein | NQ492_07370 | Not Available | + | 1690177 - 1690416 | 9026.42 |
| hypothetical protein | NQ492_07375 | Not Available | + | 1690436 - 1691062 | 24463.0 |
| hsdr family type i site-specific deoxyribonuclease | NQ492_07380 | Q60295 | + | 1691071 - 1694283 | 123686.0 |
| m48 family metallopeptidase | NQ492_07385 | Not Available | + | 1694283 - 1694978 | 27237.1 |
| Trna-cys | Not Available | Not Available | + | 1695082 - 1695152 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.