Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | NQ492_05595 | Not Available | + | 1301196 - 1301528 | 13219.0 |
| hypothetical protein | NQ492_05600 | Not Available | - | 1301584 - 1302303 | 27861.6 |
| relaxase/mobilization nuclease domain-containing protein | NQ492_05605 | P22898 | - | 1302308 - 1303231 | 34537.6 |
| mobc family plasmid mobilization relaxosome protein | NQ492_05610 | Not Available | - | 1303197 - 1303580 | 14302.4 |
| toprim domain-containing protein | NQ492_05615 | P05096 | - | 1303726 - 1304691 | 37074.0 |
| aaa family atpase | NQ492_05620 | Not Available | - | 1304855 - 1305928 | 40796.9 |
| helix-turn-helix domain-containing protein | NQ492_05625 | Not Available | - | 1305934 - 1306221 | 11280.8 |
| hypothetical protein | NQ492_05630 | Not Available | - | 1306347 - 1307255 | 35179.3 |
| pfkb family carbohydrate kinase | NQ492_05635 | Not Available | - | 1307499 - 1308086 | 21459.4 |
| tonb-dependent receptor | NQ492_05640 | Q93SE0 | - | 1308105 - 1310480 | 90069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.