Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein d | NQ492_05495 | P23840 | - | 1284064 - 1284933 | 33098.4 |
| duf87 domain-containing protein | NQ492_05500 | Q58960 | - | 1285023 - 1286771 | 65193.9 |
| sir2 family protein | NQ492_05505 | Not Available | - | 1286777 - 1287796 | 38524.1 |
| pfkb family carbohydrate kinase | NQ492_05510 | Not Available | - | 1288173 - 1288349 | 6708.31 |
| duf3408 domain-containing protein | NQ492_05515 | Not Available | - | 1288384 - 1288812 | 16736.3 |
| hypothetical protein | NQ492_05520 | Not Available | + | 1289509 - 1289925 | 16197.8 |
| rtec domain-containing protein | NQ492_05525 | Not Available | - | 1290013 - 1290339 | 12564.3 |
| ribosome biogenesis protein | NQ492_05530 | Not Available | - | 1290362 - 1290595 | 8818.9 |
| arac family transcriptional regulator | NQ492_05535 | P0ACI5 | - | 1290687 - 1291667 | 37561.5 |
| pfkb family carbohydrate kinase | NQ492_05540 | Not Available | - | 1291809 - 1292411 | 22218.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.