Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ492_05445 | Not Available | + | 1276633 - 1276968 | 12684.8 |
| hypothetical protein | NQ492_05450 | Not Available | + | 1276974 - 1277231 | 9896.67 |
| hypothetical protein | NQ492_05455 | Not Available | + | 1277247 - 1277618 | 14140.9 |
| atp-binding protein | NQ492_05460 | P44099 | - | 1277903 - 1278250 | 13114.7 |
| pfkb family carbohydrate kinase | NQ492_05465 | O52903 | - | 1278298 - 1278678 | 13824.4 |
| site-specific integrase | NQ492_05470 | Not Available | + | 1280029 - 1281099 | 41913.1 |
| voc family protein | NQ492_05475 | O31535 | - | 1281834 - 1282196 | 14278.0 |
| class i sam-dependent methyltransferase | NQ492_05480 | Q8TJK1 | - | 1282207 - 1282932 | 28091.4 |
| dj-1/pfpi family protein | NQ492_05485 | P96658 | - | 1282946 - 1283542 | 21803.2 |
| hypothetical protein | NQ492_05490 | Not Available | - | 1283547 - 1284056 | 19868.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.