Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | NQ492_05095 | P37965 | - | 1189355 - 1192804 | 129868.0 |
| fibrobacter succinogenes major paralogous domain-containing protein | NQ492_05100 | Not Available | - | 1192867 - 1195017 | 78373.3 |
| endonuclease/exonuclease/phosphatase family protein | NQ492_05105 | Not Available | - | 1195033 - 1196253 | 45196.3 |
| transposase | NQ492_05110 | Not Available | + | 1196421 - 1197335 | 35769.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ492_05115 | T2KN63 | - | 1197378 - 1199057 | 64147.2 |
| tonb-dependent receptor | NQ492_05120 | T2KPJ3 | - | 1199070 - 1202111 | 112617.0 |
| fad-dependent oxidoreductase | NQ492_05125 | Not Available | - | 1202134 - 1204419 | 84667.8 |
| na+:solute symporter | NQ492_05130 | P96169 | - | 1204435 - 1206102 | 60044.7 |
| laci family transcriptional regulator | NQ492_05135 | P46828 | + | 1206301 - 1207392 | 40770.4 |
| sugar lyase | NQ492_05140 | Q59288 | - | 1207468 - 1209513 | 75718.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.