Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain-containing protein | NQ492_05045 | Not Available | - | 1178384 - 1179454 | 39640.8 |
| mobc family plasmid mobilization relaxosome protein | NQ492_05050 | Not Available | - | 1179444 - 1179812 | 13637.0 |
| toprim domain-containing protein | NQ492_05055 | P52308 | - | 1180081 - 1180938 | 31625.0 |
| duf5906 domain-containing protein | NQ492_05060 | Not Available | - | 1181122 - 1182342 | 47715.2 |
| helix-turn-helix domain-containing protein | NQ492_05065 | Not Available | - | 1182332 - 1182637 | 11424.7 |
| hypothetical protein | NQ492_05070 | Not Available | - | 1182851 - 1183594 | 28082.6 |
| nucleotidyl transferase abieii/abigii toxin family protein | NQ492_05075 | Not Available | - | 1183597 - 1184610 | 39874.6 |
| duf6088 family protein | NQ492_05080 | Not Available | - | 1184600 - 1185208 | 22747.3 |
| site-specific integrase | NQ492_05085 | B7IFN3 | - | 1185266 - 1186669 | 53843.9 |
| alpha-galactosidase | NQ492_05090 | Q9ALJ4 | - | 1187158 - 1189350 | 81963.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.