Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | NQ492_04995 | Q81JL2 | - | 1159772 - 1161157 | 51499.8 |
| mfs transporter | NQ492_05000 | Q9FE59 | + | 1161379 - 1162686 | 46902.2 |
| tonb-dependent receptor | NQ492_05005 | Q8A1G1 | + | 1162851 - 1165772 | 107586.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ492_05010 | Q8A1G2 | + | 1165786 - 1167444 | 61123.3 |
| susf/suse family outer membrane protein | NQ492_05015 | Not Available | + | 1167468 - 1169282 | 64717.7 |
| alpha-amylase family glycosyl hydrolase | NQ492_05020 | Q8A1G3 | + | 1169390 - 1171708 | 84446.9 |
| alpha-amylase family glycosyl hydrolase | NQ492_05025 | L8B068 | + | 1171749 - 1173056 | 49175.9 |
| glycoside hydrolase family 13 protein | NQ492_05030 | Q8A1G0 | + | 1173265 - 1175142 | 70498.8 |
| glycoside hydrolase family 97 protein | NQ492_05035 | G8JZS4 | + | 1175155 - 1177350 | 82961.6 |
| hypothetical protein | NQ492_05040 | Not Available | - | 1177601 - 1178359 | 29149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.